1. Protocol for the fabrication of self-standing (nano)cellulose-based 3D scaffolds for tissue engineeringTamilselvan Mohan, Matej Bračič, Doris Bračič, Florian Lackner, Chandran Nagaraj, Andreja Dobaj-Štiglic, Rupert Kargl, Karin Stana-Kleinschek, 2025, izvirni znanstveni članek Opis: Three-dimensional (3D) and porous scaffolds made from nanocellulosic materials hold significant potential in tissue engineering (TE). Here, we present a protocol for fabricating self-standing (nano)cellulose-based 3D scaffolds designed for in vitro testing of cells from skin and cartilage tissues. We describe steps for preparation of nanocellulose ink, scaffold formation using 3D printing, and freeze-drying. We then detail post-processing procedures to enhance mechanical properties, stability, and biocompatibility. This protocol offers researchers a framework for developing versatile and sustainable biomaterials for regenerative medicine. Ključne besede: tissue engineering, 3D scaffolds, nanocellulosic materials, biocompatibility Objavljeno v DKUM: 03.11.2025; Ogledov: 0; Prenosov: 4
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2. Exploring genital lichen sclerosus : navigating from pathophysiology to precise diagnostic approachesMaja Sever, Katarina Trčko, Tanja Zidarič, Tina Maver, 2025, pregledni znanstveni članek Opis: Lichen sclerosus (LS) is a chronic, relapsing skin disease that predominantly affects the perineal and genital regions, although extragenital manifestations can occur. Despite its significant impact on patients’ quality of life, particularly affecting sexual and urinary function, LS remains underdiagnosed. Multiple factors, including genetic predisposition, hormonal changes, immunological abnormalities, trauma, and urine irritation, contribute to its development and persistence. This review aims to clarify the complex pathophysiology of LS by exploring three main mechanisms: autoimmune dysregulation, sclerotic tissue formation, and oxidative stress. Autoimmune dysregulation involves T-cell infiltration and the roles of miR-155 and extracellular matrix protein 1 dysfunction, leading to chronic inflammation. miR-155 contributes to sclerotic tissue formation alongside galectin-7, promoting fibroblast proliferation and collagen synthesis. Oxidative stress results in tissue damage, autoimmunity, chronic inflammation, and an increased risk of carcinogenesis. Understanding these mechanisms is crucial for developing targeted therapies and improving LS management. Further research is needed to unravel the genetic basis, immune responses, and interactions between key mediators, ultimately advancing innovative therapeutic strategies and precision medicine in LS. Ključne besede: lichen sclerosus, autoimmune dysregulation, sclerotic tissue, oxidative stress, genital disease Objavljeno v DKUM: 15.09.2025; Ogledov: 0; Prenosov: 45
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3. Assessing acute pancreatitis : a novel method combining live cell imaging with tissue damage evaluationPolona Kovačič, Maša Skelin, Eva Paradiž, Viktória Venglovecz, Loránd Kiss, Gabriella Mihalekné Fűr, Andraž Stožer, Jurij Dolenšek, 2025, izvirni znanstveni članek Opis: Acute pancreatitis (AP) is a sudden inflammation of the exocrine part of the pancreas, resulting in self-digestion and destruction of exocrine tissue. The intricate relationship between exocrine and endocrine functions is pivotal, as damage to acinar cells can affect endocrine cell function and vice versa. However, our understanding of these interactions remains limited. An effective strategy for investigating pancreatic cells involves the utilization of live in-situ acute mouse pancreas tissue slice preparations, combined with noninvasive fluorescent calcium labeling of endocrine or exocrine cells, and subsequent analysis using confocal laser scanning microscopy. Nevertheless, this approach encounters inherent conflicts with conventional methodologies employed to histologically assess the severity of tissue damage due to AP in the model. Traditional methods involve fixing and staining tissue samples with hematoxylin and eosin, thereby precluding live-cell imaging. In this study, our objective was to introduce an innovative method utilizing a commercial fluorescence Live/Dead assay that enables calcium imaging and tissue damage assessment in the same sample. This approach was validated against the classical histological grading of AP severity, and we found a good correlation between the classical histological grading method and the in-situ approach employing the Live/Dead assay. The primary advantage of our novel approach lies in its capacity to enable timely and efficient live-cell imaging together with damage assessment in the same tissue, thereby enabling the study of functional consequences of structural damage at the cellular level and reducing the number of animals required for experimentation. Ključne besede: acute pancreatitis, pancreatic tissue damage, exocrine and endocrine interactions, live cell imaging, confocal laser scanning microscopy, calcium imaging, live/dead assay, tissue slice preparation, histological grading Objavljeno v DKUM: 22.08.2025; Ogledov: 0; Prenosov: 5
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4. 3D-printed cellulose aerogels minimally cross-linked with polyurea : a robust strategy for tissue engineeringAna Iglesias-Mejuto, Grigorios Raptopoulos, Nanthilde Malandain, Mariana Neves Amaral, Inés Ardao Palacios, Matjaž Finšgar, Anna Laromaine, Anna Roig, Catarina Pinto Reis, Carlos A. García-González, Patrina Paraskevopoulou, 2025, izvirni znanstveni članek Opis: Cellulose and its derivatives are increasingly explored in biomedical applications due to their biocompatibility,biodegradability, and mechanical performance. In regenerative medicine, aerogel scaffolds with tunable morphology and compositionare highly valued for their ability to support tissue regeneration. Three-dimensional (3D) printing offers an effective method tofabricate aerogels with hierarchical pore structures, comprising interconnected macropores and mesopores, that are crucial for tissueengineering. For clinical use, 3D printing should ensure the structural integrity of printed structures and achieve a printing resolutionthat allows for customization. In this work, the X-aerogel technology, implemented via polyurea cross-linking, was applied to 3D-printed cellulose structures, thereby expanding the potential applications of both technologies. Specifically, 3D-printedmethylcellulose (MC) and MC doped with bacterial cellulose nanofiber (MCBCf) gels were cross-linked with an aliphaticpolyurea, yielding, after supercritical drying, the corresponding (X-MC and X-MCBCf) aerogels. Elaborate characterization withATR-FTIR, XPS, ToF-SIMS, N2 porosimetry, He pycnometry, and SEM confirmed the formation of polyurea on the biopolymerframework, reinforcing the structure and improving the mechanical properties without altering the morphology or texturalcharacteristics of the materials. A significant outcome of cross-linking with polyurea is the long-term stability of X-MC and X-MCBCf aerogels in water, in contrast to their native counterparts, and their capacity to absorb water up to 1800% w/w within only 2h. Preliminary biological evaluation of the materials, including in vitro (cell compatibility, hemolytic activity), in ovo (HET-CAM),and in vivo (A. salina model) tests, showed good cell viability, blood compatibility, and safety for living organisms. From afundamental materials perspective, the most important finding of this work is the disproportionally high stability of X-MC and X-MCBCf in physiological environments, achieved with only a minimal (almost undetectable) amount of cross-linking polyurea. Froman application standpoint, the findings of this study, collectively, position these aerogels as sustainable and promising candidates fortissue engineering scaffolds. Ključne besede: 3D printing, aerogels, cellulose, methylcellulose, polyurea, tissue engineering, X-aerogels Objavljeno v DKUM: 30.05.2025; Ogledov: 0; Prenosov: 6
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5. Integrating live cell calcium imaging and tissue damage assessment in a novel model of acute pancreatitisPolona Kovačič, Maša Skelin, Eva Paradiž, Viktória Venglovecz, Loránd Kiss, Gabriella Mihalekné Fűr, Andraž Stožer, Jurij Dolenšek, 2025, objavljeni povzetek znanstvenega prispevka na konferenci Ključne besede: acute pancreatitis, calcium imaging, LiveDead assay, pancreatic tissue slices, histological analysis Objavljeno v DKUM: 31.03.2025; Ogledov: 0; Prenosov: 16
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6. Lipid deposition and metabolism in local and modern pig breeds : a reviewKlavdija Poklukar Žnidaršič, Marjeta Čandek-Potokar, Nina Batorek Lukač, Urška Tomažin, Martin Škrlep, 2020, pregledni znanstveni članek Opis: Modern pig breeds, which have been genetically improved to achieve fast growth and a lean meat deposition, differ from local pig breeds with respect to fat deposition, fat specific metabolic characteristics and various other properties. The present review aimed to elucidate the mechanisms underlying the differences between fatty local and modern lean pig breeds in adipose tissue deposition and lipid metabolism, taking into consideration morphological, cellular, biochemical, transcriptomic and proteomic perspectives. Compared to modern breeds, local pig breeds accumulate larger amounts of fat, which generally contains more monounsaturated and saturated fatty acids; they exhibit a higher adipocyte size and higher activity of lipogenic enzymes. Studies using transcriptomic and proteomic approaches highlighted several processes like immune response, fatty-acid turn-over, oxidoreductase activity, mitochondrial function, etc. which differ between local and modern pig breeds. Ključne besede: pig, adipose tissue, local breeds, modern breeds, cellularity, transcriptome, proteom, adaptation Objavljeno v DKUM: 06.02.2025; Ogledov: 0; Prenosov: 7
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7. Integrirani molekularni tkivni označevalci : matematični model v pristopu k oceni in predvidevanju raka prostate s tkivnimi molekularnimi označevalciMiha Munda, 2024, izvirni znanstveni članek Opis: Standardni kriteriji za diagnozo raka prostate mnogokrat niso zadostni, da bi predvideli potek in izhod te pogoste bolezni. Vrednotenje molekularnih tkivnih označevalcev, še posebej tistih, ki označujejo apoptozo in proliferacijo, integrirani v matematični model, lahko pridonese k boljšemu razumevanju razvoja in patogeneze te bolezni; nadalje tudi k izboru oz. določitvi adekvatne terapije in bi odprlo tudi nove perspektive v iskanju novih terapij. Ključne besede: matematični model, rak prostate, tkivni označevalec, p53, bcl-2, CD105, mathematical model, prostate cancer, tissue marker, p53, bcl-2, CD105 Objavljeno v DKUM: 28.01.2025; Ogledov: 0; Prenosov: 20
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8. Mesenchymal stem cells isolated from paediatric paravertebral adipose tissue show strong osteogenic potentialJan Rožanc, Lidija Gradišnik, Tomaž Velnar, Minja Gregorič, Marko Milojević, Boštjan Vihar, Boris Gole, Uroš Maver, 2022, izvirni znanstveni članek Opis: Mesenchymal stem cells (MSCs) represent the basis of novel clinical concepts in cellular therapy and tissue regeneration. Therefore, the isolation of MSCs from various tissues has become an important endeavour for stem cell biobanking and the development of regenerative therapies. Paravertebral adipose tissue is readily exposed during spinal procedures in children and could be a viable source of stem cells for therapeutic applications. Here, we describe the first case of MSCs isolated from paravertebral adipose tissue (PV-ADMSCs), obtained during a routine spinal surgery on a child. Using quantitative real-time PCR and flow cytometry, we show that PV-ADMSCs have different levels of stem marker expression compared to the MSCs from other sources while having the highest proliferation rate. Furthermore, we evaluate the multipotency of PV-ADMSCs by the three-lineage (adipogenic, osteogenic and chondrogenic) differentiation and compare it to the multipotency of MSCs from other sources. It was found that the PV-ADMSCs have a strong osteogenic potential in particular. Taken together, our data indicate that PV-ADMSCs meet the criteria for successful cell therapy, defined by the International Society for Cellular Therapy (ISCT), and thus, could provide a source of MSCs that is relatively easy to isolate and expand in culture. Due to their strong osteogenic potential, these cells provide a promising basis, especially for orthopaedic applications. Ključne besede: mesenchymal stem cells, paediatric surgery, paravertebral adipose tissue, regenerative medicine, stem marker expression, osteogenic potential, differentiation Objavljeno v DKUM: 16.12.2024; Ogledov: 0; Prenosov: 13
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9. Isolation of live cells from different mice tissues up to nine days after deathMetka Voga, Ana Pleterski, Gregor Majdič, 2021, izvirni znanstveni članek Opis: Some limited reports suggest that cells can survive in the cadavers for much longer than it was previously thought. In our study we explored how time after death, tissue type (muscle, brain and adipose tissue), storage temperature of cadavers (4 °C or at room temperature) and form of tissue storage (stored as cadavers or tissue pieces in phosphate buffered saline) affect the success of harvesting live cells from mice after death. Cells were isolated from dead tissues and grown in standard conditions. Some cells were used for RNA extraction and RT² Profiler™ PCR Array for cell lineage identification was performed to establish which lineages the cells obtained from post mortem tissues belong to. Results of our study showed that viable cells can be regularly isolated from muscle and brain tissue 3 days post mortem and with difficulty up to 6 days post mortem. Viable cells from brain tissue can be isolated up to 9 days post mortem. No cells were isolated from adipose tissue except immediately after death. In all instances viable cells were isolated only when tissues were stored at 4 °C. Tissue storage did not affect cell isolation. Isolated cells were progenitors from different germ layers. Our results show that live cells could be obtained from mouse cadavers several days after death. Ključne besede: mouse, cadaver, stem cells, brain, muscle, adipose tissue Objavljeno v DKUM: 21.10.2024; Ogledov: 0; Prenosov: 5
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10. Microvascular tissue engineering : a reviewJernej Vajda, Marko Milojević, Uroš Maver, Boštjan Vihar, 2021, pregledni znanstveni članek Opis: Tissue engineering and regenerative medicine have come a long way in recent decades, but the lack of functioning vasculature is still a major obstacle preventing the development of thicker, physiologically relevant tissue constructs. A large part of this obstacle lies in the development of the vessels on a microscale%the microvasculature%that are crucial for oxygen and nutrient delivery. In this review, we present the state of the art in the field of microvascular tissue engineering and demonstrate the challenges for future research in various sections of the field. Finally, we illustrate the potential strategies for addressing some of those challenges. Ključne besede: regenerative medicine, tissue engineering, vascularization, biomaterials, microvascularization, coculture, gradients Objavljeno v DKUM: 18.10.2024; Ogledov: 0; Prenosov: 13
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