1. Glucose-dependent activation, activity, and deactivation of beta cell networks in acute mouse pancreas tissue slicesAndraž Stožer, Maša Skelin, Marko Gosak, Lidija Križančić Bombek, Viljem Pohorec, Marjan Rupnik, Jurij Dolenšek, 2021, izvirni znanstveni članek Opis: Many details of glucose-stimulated intracellular calcium changes in [beta] cells during activation, activity, and deactivation, as well as their concentration-dependence, remain to be analyzed. Classical physiological experiments indicated that in islets, functional differences between individual cells are largely attenuated, but recent findings suggest considerable intercellular heterogeneity, with some cells possibly coordinating the collective responses. To address the above with an emphasis on heterogeneity and describing the relations between classical physiological and functional network properties, we performed functional multicellular calcium imaging in mouse pancreas tissue slices over a wide range of glucose concentrations. During activation, delays to activation of cells and any-cell-to-first-responder delays are shortened, and the sizes of simultaneously responding clusters increased with increasing glucose concentrations. Exactly the opposite characterized deactivation. The frequency of fast calcium oscillations during activity increased with increasing glucose up to 12 mM glucose concentration, beyond which oscillation duration became longer, resulting in a homogenous increase in active time. In terms of functional connectivity, islets progressed from a very segregated network to a single large functional unit with increasing glucose concentration. A comparison between classical physiological and network parameters revealed that the first-responders during activation had longer active times during plateau and the most active cells during the plateau tended to deactivate later. Cells with the most functional connections tended to activate sooner, have longer active times, and deactivate later. Our findings provide a common ground for recent differing views on [beta] cell heterogeneity and an important baseline for future studies of stimulus-secretion and intercellular coupling.
NEW & NOTEWORTHY: We assessed concentration-dependence in coupled [beta] cells, degree of functional heterogeneity, and uncovered possible specialized subpopulations during the different phases of the response to glucose at the level of many individual cells. To this aim, we combined acute mouse pancreas tissue slices with functional multicellular calcium imaging over a wide range from threshold (7 mM) and physiological (8 and 9 mM) to supraphysiological (12 and 16 mM) glucose concentrations, classical physiological, and advanced network analyses. Ključne besede: beta cells, calcium imaging, glucose-dependence, network analysis Objavljeno v DKUM: 15.10.2024; Ogledov: 0; Prenosov: 6 Celotno besedilo (4,37 MB) Gradivo ima več datotek! Več... |
2. Enhancing PLS-SEM-Enabled research with ANN and IPMA : research study of enterprise resource planning (ERP) systems’ acceptance based on the technology acceptance model (TAM)Simona Sternad Zabukovšek, Samo Bobek, Uroš Zabukovšek, Zoran Kalinić, Polona Tominc, 2022, izvirni znanstveni članek Opis: PLS-SEM has been used recently more and more often in studies researching critical factors influencing the acceptance and use of information systems, especially when the technology acceptance model (TAM) is implemented. TAM has proved to be the most promising model for researching different viewpoints regarding information technologies, tools/applications, and the acceptance and use of information systems by the employees who act as the end-users in companies. However, the use of advanced PLS-SEM techniques for testing the extended TAM research models for the acceptance of enterprise resource planning (ERP) systems is scarce. The present research aims to fill this gap and aims to show how PLS-SEM results can be enhanced by advanced techniques: artificial neural network analysis (ANN) and Importance–Performance Matrix Analysis (IPMA). ANN was used in this research study to overcome the limitations of PLS-SEM regarding the linear relationships in the model. IPMA was used in evaluating the importance and performance of factors/drivers in the SEM. From the methodological point of view, results show that the research approach with ANN artificial intelligence complements the results of PLS-SEM while allowing the capture of nonlinear relationships between the variables of the model and the determination of the relative importance of each factor studied. On other hand, IPMA enables the identification of factors with relatively low performance but relatively high importance in shaping dependent variables. Ključne besede: traditional PLS-SEM, artificial neural network (ANN) analysis, Importance–Performance Matrix Analysis (IPMA), ERP system acceptance, TAM model Objavljeno v DKUM: 09.07.2024; Ogledov: 103; Prenosov: 12 Celotno besedilo (2,52 MB) Gradivo ima več datotek! Več... |
3. Assessing different temporal scales of calcium dynamics in networks of beta cell populationsJan Zmazek, Maša Skelin, Rene Markovič, Jurij Dolenšek, Marko Marhl, Andraž Stožer, Marko Gosak, 2021, izvirni znanstveni članek Opis: Beta cells within the pancreatic islets of Langerhans respond to stimulation with coherent oscillations of membrane potential and intracellular calcium concentration that presumably drive the pulsatile exocytosis of insulin. Their rhythmic activity is multimodal, resulting from networked feedback interactions of various oscillatory subsystems, such as the glycolytic, mitochondrial, and electrical/calcium components.How these oscillatory modules interact and affect the collective cellular activity, which is a prerequisite for proper hormone release, is incompletely understood. In the present work, we combined advanced confocal Ca2+ imaging in fresh mouse pancreas tissue
slices with time series analysis and network science approaches to unveil the glucosedependent characteristics of different oscillatory components on both the intra- and inter-cellular level. Our results reveal an interrelationship between the metabolically driven low-frequency component and the electrically driven high-frequency component, with the latter exhibiting the highest bursting rates around the peaks of the slow
component and the lowest around the nadirs. Moreover, the activity, as well as the average synchronicity of the fast component, considerably increased with increasing stimulatory glucose concentration, whereas the stimulation level did not affect any of these parameters in the slow component domain. Remarkably, in both dynamical components, the average correlation decreased similarly with intercellular distance, which implies that intercellular communication affects the synchronicity of both types of oscillations. To explore the intra-islet synchronization patterns in more detail, we constructed functional connectivity maps. The subsequent comparison of network characteristics of different oscillatory components showed more locally clustered and segregated networks of fast oscillatory activity, while the slow oscillations were more global, resulting in several long-range connections and a more cohesive structure. Besides the structural differences, we found a relatively weak relationship between the fast and slow network layer, which suggests that different synchronization mechanisms
shape the collective cellular activity in islets, a finding which has to be kept in mind in future studies employing different oscillations for constructing networks. Ključne besede: islets of Langerhans, beta cell network, calcium oscillations, multimodal activity analysis, confocal imaging, functional connectivity, multiplex network Objavljeno v DKUM: 06.06.2024; Ogledov: 171; Prenosov: 6 Celotno besedilo (9,40 MB) Gradivo ima več datotek! Več... |
4. Hotel branding exposed : a content analysis of related organisational valuesKristijan Breznik, Kris Law, Mitja Gorenak, 2021, izvirni znanstveni članek Opis: Background/Purpose: This paper explores how organisational values can help to understand the interlinks of hotel brands and their hotel rating. The study assumes that the importance of organisational values in the service sector represents one of the key components of both growth and development of an organisation.
Methods: Conceptual content analysis was used on the dataset of organisational values found on websites of the top 100 European hotel brands. Advanced network analytic procedures were applied to identify clustered dimensions of organisational values among various hotel brands.
Results: Results identified shared organisational values among hotel brands clustered into four predominant dimensions: entrepreneurial, stakeholders, moral, and tradition. The study confirmed wide content variability of organisational values within the hotel brand industry.
Conclusion: The cluster analysis identified clusters of the most important words from values statements, concluding that hotel brands highly value “entrepreneurial” and “ethical” clusters. The island analysis approach on hotel brands’ level also reveals that organisational values in this sector are determined by many factors, including the scale and market positioning. Our study provides theoretical and practical implications to hotel brand strategists in order to better understand their current and desired sector position. Ključne besede: organisational values, hotel industry, branding, content analysis, network analysis Objavljeno v DKUM: 15.09.2022; Ogledov: 445; Prenosov: 25 Celotno besedilo (1,01 MB) Gradivo ima več datotek! Več... |
5. GNSS monitoring of geologically demanding areasBoštjan Kovačič, Boško Pribičević, Rok Kamnik, 2016, izvirni znanstveni članek Opis: Displacement research using the three-dimensional global navigation satellite system (GNSS) as part of geodetic monitoring is becoming the key investigation for establishing a cause-and-effect relationships model between external natural factors, on the one hand, and the criteria that describes the level of functionality and safety of the observed natural or artificial object, on the other, in cases of motion of an object in space and time. The main objective of the deformation analysis is to confirm the stabilities of the reference points of a geodetic network, which are used to determine the movements of the control points that are stabilized on the observed objects. The assumption about the stabilities of certain reference points must be based on reasonable grounds, underpinned by measurements and proven by numerical methods. This is one part of the results of the deformation analysis when determining the extent of the movements and deformations. To do this a transformation is used in which a comparison is made between the coordinates of the points for two separate epochs. On the basis of the estimated transformation parameters, possible movements can be concluded within the reference points, i.e., on whether the datum parameters have changed. After confirming the stability of the geodetic network the coordinate differences of identical points measured within the different time windows can be determined as displacements and/or deformations of an object. In this paper one viaduct was assessed through geology and tectonic activities and also a load test of the viaduct was performed. The viaduct is in a quite active region, but the load test showed that the bridge response to the load is as expected. Ključne besede: geodesy, geotehnics, monitoring, GNSS measurements, geology, deformation analysis, geodetic network Objavljeno v DKUM: 18.06.2018; Ogledov: 1784; Prenosov: 76 Celotno besedilo (630,78 KB) Gradivo ima več datotek! Več... |
6. Automatic S-phase arrival identification for local earthquakesIzidor Tasič, Franc Runovc, 2009, izvirni znanstveni članek Opis: In the case of a strong local earthquake, a quick report about the earthquake’s location is expected. Such reports are usually performed automatically, where the identification of the seismic-phase arrival of the various seismic waves on the seismogram is the most important task. For this purpose, numerous detecting methods for the first P-wave arrival identification and determination are used. But in some cases, where the number of seismic stations in a local seismic network is very small, an automatic reading of the S-wave arrival is required. An algorithm for the automatic picking of the S wave arrival from three-component seismic data has been developed. Three parameters of the signal are calculated from these data and the S phase arrival is declared when the product of the three parameters increases above a reference level. Such a so-called S-phase picker is used to automatically analyze the data from local earthquakes in Slovenia's seismic network. Ključne besede: seismic waves, P and S waves, analysis of seismogram data, automatic picking of the S-wave arrival, seismic station, seismic network Objavljeno v DKUM: 06.06.2018; Ogledov: 1092; Prenosov: 201 Celotno besedilo (283,31 KB) Gradivo ima več datotek! Več... |
7. Link prediction on TwitterSanda Martinčić-Ipšić, Edvin Močibob, Matjaž Perc, 2017, izvirni znanstveni članek Opis: With over 300 million active users, Twitter is among the largest online news and social networking services in existence today. Open access to information on Twitter makes it a valuable source of data for research on social interactions, sentiment analysis, content diffusion, link prediction, and the dynamics behind human collective behaviour in general. Here we use Twitter data to construct co-occurrence language networks based on hashtags and based on all the words in tweets, and we use these networks to study link prediction by means of different methods and evaluation metrics. In addition to using five known methods, we propose two effective weighted similarity measures, and we compare the obtained outcomes in dependence on the selected semantic context of topics on Twitter. We find that hashtag networks yield to a large degree equal results as all-word networks, thus supporting the claim that hashtags alone robustly capture the semantic context of tweets, and as such are useful and suitable for studying the content and categorization. We also introduce ranking diagrams as an efficient tool for the comparison of the performance of different link prediction algorithms across multiple datasets. Our research indicates that successful link prediction algorithms work well in correctly foretelling highly probable links even if the information about a network structure is incomplete, and they do so even if the semantic context is rationalized to hashtags. Ključne besede: link prediction, data mining, Twitter, network analysis Objavljeno v DKUM: 15.09.2017; Ogledov: 1864; Prenosov: 204 Celotno besedilo (6,98 MB) Gradivo ima več datotek! Več... |
8. Insights into population health management through disease diagnoses networksKeith Feldman, Gregor Štiglic, Dipanwita Dasgupta, Mark Kricheff, Zoran Obradović, Nitesh Chawla, 2016, izvirni znanstveni članek Opis: The increasing availability of electronic health care records has provided remarkable progress in the field of population health. In particular the identification of disease risk factors has flourished under the surge of available data. Researchers can now access patient data across a broad range of demographics and geographic locations. Utilizing this Big healthcare data researchers have been able to empirically identify specific high-risk conditions found within differing populations. However to date the majority of studies approached the issue from the top down, focusing on the prevalence of specific diseases within a population. Through our work we demonstrate the power of addressing this issue bottom-up by identifying specifically which diseases are higher-risk for a specific population. In this work we demonstrate that network-based analysis can present a foundation to identify pairs of diagnoses that differentiate across population segments. We provide a case study highlighting differences between high and low income individuals in the United States. This work is particularly valuable when addressing population health management within resource-constrained environments such as community health programs where it can be used to provide insight and resource planning into targeted care for the population served. Ključne besede: population screening, risk factors, network analysis Objavljeno v DKUM: 23.06.2017; Ogledov: 1537; Prenosov: 402 Celotno besedilo (743,53 KB) Gradivo ima več datotek! Več... |
9. Direct enthalpy exchange between process utilitiesZorka Novak-Pintarič, Peter Glavič, 2002, strokovni članek Opis: This paper presents an application of the improved pinch methodology by performing a simplified exergy analysis in a real-size ammonia plant. Besides the well known pinch technics like composite curves and grand composite curve, the improved approach with the extended grand composite curve was implemented. The latter presents the most energy intensive units in the process separated from the process background as well as the direct transfer of enthalpy from hot utilities to cold utilities. Based on this presentation the synthesis of modified heat exchanger network was performed which results in considerable decrease of utilities demand. Ključne besede: chemical engineering, process design, exergy analysis, ammonia plant, pinch methodology, extended hrand composite curve method, enthalpy exchange, distillation column, heat exchanger network Objavljeno v DKUM: 10.07.2015; Ogledov: 1830; Prenosov: 110 Celotno besedilo (182,17 KB) Gradivo ima več datotek! Več... |
10. The complexity of porous structure of building materialsMarko Samec, 2011, doktorska disertacija Opis: This thesis seeks to establish the link between the structure (in a topological sense) of porous space and charged particle dynamics in porous matter, specifically in constituent elements of sustainable building materials such as clay, cement and soil. The work done is a combination of experimental research and modelling of analysed data using advanced and expanded network models to model pore structure and generalized conductivity model. The main outcome of this doctoral thesis is the demonstration that there is a correlation between the large scale structure of the pore space and the properties of the motion of charged particles through the pore space. This was achieved by conducting two experiments: the structure of pore space of selected porous materials (soil samples, clays, cements, clay-cement mixtures) was investigated using state-of-the-art X-ray computed microtomography, while the dynamics of charged particles in the samples was probed using low-frequency dielectric spectroscopy. The research done and described in the thesis is directed towards the advancement of understanding the transport phenomena and the structure of porous media which is of paramount importance for solving problems in building physics dealing with moist transport in building's envelope, the building-ground interaction, and in transport of contaminants in the vicinity of the repositories where the transfer of moist through soil can be the source of contamination. Ključne besede: porous matter, clay-water system, hydrating cement, fractional dynamics, dielectric response, X-ray computed tomography, image analysis, complex network Objavljeno v DKUM: 11.05.2011; Ogledov: 4887; Prenosov: 272 Celotno besedilo (34,69 MB) |