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1.
Simulation study of different OPM-MEG measurement components
Urban Marhl, Tilmann Sander, Vojko Jazbinšek, 2022, izvirni znanstveni članek

Opis: Magnetoencephalography (MEG) is a neuroimaging technique that measures the magnetic fields of the brain outside of the head. In the past, the most suitable magnetometer for MEG was the superconducting quantum interference device (SQUID), but in recent years, a new type has also been used, the optically pumped magnetometer (OPM). OPMs can be configured to measure multiple directions of magnetic field simultaneously. This work explored whether combining multiple directions of the magnetic field lowers the source localization error of brain sources under various conditions of noise. We simulated dipolar-like sources for multiple configurations of both SQUID- and OPM-MEG systems. To test the performance of a given layout, we calculated the average signal-to-noise ratio and the root mean square of the simulated magnetic field; furthermore, we evaluated the performance of the dipole fit. The results showed that the field direction normal to the scalp yields a higher signal-to-noise ratio and that ambient noise has a much lower impact on its localization error; therefore, this is the optimal choice for source localization when only one direction of magnetic field can be measured. For a low number of OPMs, combining multiple field directions greatly improves the source localization results. Lastly, we showed that MEG sensors that can be placed closer to the brain are more suitable for localizing deeper sources.
Ključne besede: magnetoencephalography, optically pumped magnetometers, superconducting quantum interference device, volume conductor, boundary element method, equivalent current dipole, source localization, ambient noise, spontaneous brain noise
Objavljeno v DKUM: 16.12.2024; Ogledov: 0; Prenosov: 2
.pdf Celotno besedilo (5,06 MB)
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2.
QM-CSA: a novel quantum mechanics-based protocol for evaluation of the carcinogen-scavenging activity of polyphenolic compounds
Veronika Furlan, Jelena Tošović, Urban Bren, 2024, izvirni znanstveni članek

Opis: In this study, a novel quantum mechanics-based protocol for the evaluation of carcinogenscavenging activity (QM-CSA) is developed. The QM-CSA protocol represents a universal and quantitative approach to evaluate and compare the activation-free energies for alkylation reactions between individual polyphenolic compounds and chemical carcinogens of the epoxy type at physiological conditions by applying two scales: the absolute scale allowing for the comparison with guanine and the relative scale allowing the comparison with glutathione as a reference compound. The devised quantum mechanical methodology was validated by comparing the activation-free energies calculated with 14 DFT functionals in conjunction with two implicit solvation models (SMD and CPCM) and the experimental activation-free energies for reactions between nine investigated chemical carcinogens and guanine. According to the obtained results, the best agreement with experimental data was achieved by applying DFT functionals M11-L and MN12-L in conjunction with the flexible 6-311++G(d,p) basis set and implicit solvation model SMD, and the obtained uncertainties were proven to be similar to the experimental ones. To demonstrate the applicability of the QM-CSA protocol, functionals M11-L, and MN12-L in conjunction with the SMD implicit solvation model were applied to calculate activation-free energies for the reactions of nine investigated chemical carcinogens of the epoxy type with three catechins, namely EGCG, EGC, and (+)-catechin. The order of CSA in this series of catechins in comparison to guanine and glutathione was determined as (+)-catechin > EGC > EGCG. The obtained results, for the first time, demonstrated the evaluation and comparison of CSA in a series of selected catechins with respect to glutathione and guanine. Moreover, the presented results provide valuable insights into the reaction mechanisms and configurations of the corresponding transition states. The novel QM-CSA protocol is also expected to expand the kinetic data for alkylation reactions between various polyphenolic compounds and chemical carcinogens of the epoxy type, which is currently lacking in the scientific literature
Ključne besede: activation-free energies, chemical carcinogens, polyphenols, guanine, glutathione, quantum mechanical calculations, M11-L and MN12-L DFT functionals
Objavljeno v DKUM: 04.09.2024; Ogledov: 39; Prenosov: 5
.pdf Celotno besedilo (10,13 MB)

3.
Precision magnetometry exploiting excited state quantum phase transitions
Qian Wang, Ugo Marzolino, 2024, izvirni znanstveni članek

Opis: Critical behaviour in phase transitions is a resource for enhanced precision metrology. The reason is that the function, known as Fisher information, is superextensive at critical points, and, at the same time, quantifies performances of metrological protocols. Therefore, preparing metrological probes at phase transitions provides enhanced precision in measuring the transition control parameter. We focus on the Lipkin-Meshkov-Glick model that exhibits excited state quantum phase transitions at different magnetic fields. Resting on the model spectral properties, we show broad peaks of the Fisher information, and propose efficient schemes for precision magnetometry. The Lipkin-Meshkov-Glick model was first introduced for superconductivity and for nuclear systems, and recently realised in several condensed matter platforms. The above metrological schemes can be also exploited to measure microscopic properties of systems able to simulate the LipkinMeshkov-Glick model.
Ključne besede: magnetometry, quantum phase transitions, precision, measurements
Objavljeno v DKUM: 22.08.2024; Ogledov: 62; Prenosov: 10
.pdf Celotno besedilo (1,52 MB)
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4.
Experimental advances in nanoparticle-driven stabilization of liquid-crystalline blue phases and twist-grain boundary phases
George Cordoyiannis, Marta Lavrič, Vasileios Tzitzios, Maja Trček, Ioannis Lelidis, George Nounesis, Samo Kralj, Jan Thoen, Zdravko Kutnjak, 2021, pregledni znanstveni članek

Opis: Recent advances in experimental studies of nanoparticle-driven stabilization of chiral liquid-crystalline phases are highlighted. The stabilization is achieved via the nanoparticles’ assembly in the defect lattices of the soft liquid-crystalline hosts. This is of significant importance for understanding the interactions of nanoparticles with topological defects and for envisioned technological applications. We demonstrate that blue phases are stabilized and twist-grain boundary phases are induced by dispersing surface-functionalized CdSSe quantum dots, spherical Au nanoparticles, as well as MoS2 nanoplatelets and reduced-graphene oxide nanosheets in chiral liquid crystals. Phase diagrams are shown based on calorimetric and optical measurements. Our findings related to the role of the nanoparticle core composition, size, shape, and surface coating on the stabilization effect are presented, followed by an overview of and comparison with other related studies in the literature. Moreover, the key points of the underlying mechanisms are summarized and prospects in the field are briefly discussed.
Ključne besede: liquid crystals, nanoparticles, quantum dots, reduced-graphene oxide, calorimetry, microscopy, blue phases, twist-grain boundary phases, disclination lines, screw dislocations
Objavljeno v DKUM: 09.08.2024; Ogledov: 97; Prenosov: 9
.pdf Celotno besedilo (8,25 MB)
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5.
Separability of the Dirac equation in the STU black hole spacetime : Pairwise-equal charge case study
Mirjam Cvetič, M. M. Stetsko, 2023, izvirni znanstveni članek

Opis: We study the separability of the Dirac equation in the background of four dimensional charged rotating asymptotically flat black hole solution of supergravity and the low energy string theory known as STU black hole. In particular, we analyze in detail the separability conditions in the pairwise equal charge STU black hole space-time [M. Cvetič and D. Youm, Phys. Rev. D 54, 2612 (1996).]. While in the latter case the minimally coupled Dirac equation is not separable, the introduction of a specific torsion term ensures the separability. The source of the torsion is the Kalb-Ramond field, which is an integral part of string theory, but further aspects of its properties and coupling to fermionic fields remain to be studied. To derive the torsion, two different approaches are used in conformally related frames, showing that the torsion is not unique. The correspondingly modified Dirac equations in the Einstein and string frames are shown to be separable. Furthermore, the massless radial and angular wave equations are examined; they show close similarity with corresponding equations for the standard Kerr background. A generalization of the Teukolsky equation for the pairwise equal case is conjectured. We also briefly analyze a technically sophisticated radial equation in the massive case.
Ključne besede: quantum fields of spacetime, supergravity, curved spacetime, Dirac equation
Objavljeno v DKUM: 19.07.2024; Ogledov: 165; Prenosov: 10
.pdf Celotno besedilo (373,36 KB)
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6.
Transforming and comparing data between standard SQUID and OPM-MEG systems
Urban Marhl, Anna Jodko-Wladzinska, Rüdiger Brühl, Tilmann Sander, Vojko Jazbinšek, 2022, izvirni znanstveni članek

Opis: Optically pumped magnetometers (OPMs) have recently become so sensitive that they are suitable for use in magnetoencephalography (MEG). These sensors solve operational problems of the current standard MEG, where superconducting quantum interference device (SQUID) gradiometers and magnetometers are being used. The main advantage of OPMs is that they do not require cryogenics for cooling. Therefore, they can be placed closer to the scalp and are much easier to use. Here, we measured auditory evoked fields (AEFs) with both SQUID- and OPM-based MEG systems for a group of subjects to better understand the usage of a limited sensor count OPM-MEG. We present a theoretical framework that transforms the within subject data and equivalent simulation data from one MEG system to the other. This approach works on the principle of solving the inverse problem with one system, and then using the forward model to calculate the magnetic fields expected for the other system. For the source reconstruction, we used a minimum norm estimate (MNE) of the current distribution. Two different volume conductor models were compared: the homogeneous conducting sphere and the three-shell model of the head. The transformation results are characterized by a relative error and cross-correlation between the measured and the estimated magnetic field maps of the AEFs. The results for both models are encouraging. Since some commercial OPMs measure multiple components of the magnetic field simultaneously, we additionally analyzed the effect of tangential field components. Overall, our dual-axis OPM-MEG with 15 sensors yields similar information to a 62-channel SQUID-MEG with its field of view restricted to the right hemisphere.
Ključne besede: optically pumped magnetometer, magnetoencephalography, superconducting quantum interference device, magnetic field map
Objavljeno v DKUM: 26.06.2024; Ogledov: 153; Prenosov: 16
.pdf Celotno besedilo (3,40 MB)
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7.
Nanomaterials and their recent applications in impedimetric biosensing
Zala Štukovnik, Regina Fuchs-Godec, Urban Bren, 2023, pregledni znanstveni članek

Opis: Impedimetric biosensors measure changes in the electrical impedance due to a biochemical process, typically the binding of a biomolecule to a bioreceptor on the sensor surface. Nanomaterials can be employed to modify the biosensor's surface to increase the surface area available for biorecognition events, thereby improving the sensitivity and detection limits of the biosensor. Various nanomaterials, such as carbon nanotubes, carbon nanofibers, quantum dots, metal nanoparticles, and graphene oxide nanoparticles, have been investigated for impedimetric biosensors. These nanomaterials have yielded promising results in improving sensitivity, selectivity, and overall biosensor performance. Hence, they offer a wide range of possibilities for developing advanced biosensing platforms that can be employed in various fields, including healthcare, environmental monitoring, and food safety. This review focuses on the recent developments in nanoparticle-functionalized electrochemical-impedimetric biosensors.
Ključne besede: impedimetric biosensor, electrochemical impedance spectroscopy, nanomaterials, metal nanoparticles, carbon nanofibers, carbon nanotubes, graphene oxide, quantum dots
Objavljeno v DKUM: 12.02.2024; Ogledov: 6175; Prenosov: 24
.pdf Celotno besedilo (3,14 MB)
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8.
Statistics of limit root bundles relevant for exact matter spectra of F-theory MSSMs
Martin Bies, Mirjam Cvetič, Mingqiang Liu, 2021, izvirni znanstveni članek

Opis: In the largest, currently known, class of one quadrillion globally consistent F-theory Standard Models with gauge coupling unification and no chiral exotics, the vectorlike spectra are counted by cohomologies of root bundles. In this work, we apply a previously proposed method to identify toric base threefolds, which are promising to establish F-theory Standard Models with exactly three quark doublets and no vectorlike exotics in this representation. The base spaces in question are obtained from triangulations of 708 polytopes. By studying root bundles on the quark-doublet curve Cð3;2Þ1=6 and employing well-known results about desingularizations of toric K3 surfaces, we derive a triangulation independent lower bound Nˇ ð3Þ P for the number Nð3Þ P of root bundles on Cð3;2Þ1=6 with exactly three sections. The ratio Nˇ ð3Þ P =NP, where NP is the total number of roots on Cð3;2Þ1=6 , is largest for base spaces associated with triangulations of the eighth three-dimensional polytope Δ∘ 8 in the Kreuzer-Skarke list. For each of these Oð1015Þ threefolds, we expect that many root bundles on Cð3;2Þ1=6 are induced from F-theory gauge potentials and that at least every 3000th root on Cð3;2Þ1=6 has exactly three global sections and thus no exotic vectorlike quark-doublet modes.
Ključne besede: astrophysics, compactification, string theory models, geometry, higher-dimensional field theories, mathematical physics, quantum fields in curved spacetime, string phenomenology, supersymmetric models, topology
Objavljeno v DKUM: 16.10.2023; Ogledov: 317; Prenosov: 29
.pdf Celotno besedilo (444,13 KB)
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9.
Multifractality in quasienergy space of coherent states as a signature of quantum chaos
Qian Wang, Marko Robnik, 2021, izvirni znanstveni članek

Opis: We present the multifractal analysis of coherent states in kicked top model by expanding them in the basis of Floquet operator eigenstates. We demonstrate the manifestation of phase space structures in the multifractal properties of coherent states. In the classical limit, the classical dynamical map can be constructed, allowing us to explore the corresponding phase space portraits and to calculate the Lyapunov exponent. By tuning the kicking strength, the system undergoes a transition from regularity to chaos. We show that the variation of multifractal dimensions of coherent states with kicking strength is able to capture the structural changes of the phase space. The onset of chaos is clearly identified by the phase-space-averaged multifractal dimensions, which are well described by random matrix theory in a strongly chaotic regime. We further investigate the probability distribution of expansion coefficients, and show that the deviation between the numerical results and the prediction of random matrix theory behaves as a reliable detector of quantum chaos.
Ključne besede: quantum chaos, multifractal analysis, kicked top, coherent states
Objavljeno v DKUM: 13.10.2023; Ogledov: 433; Prenosov: 31
.pdf Celotno besedilo (3,13 MB)
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10.
Fluctuating number of energy levels in mixed-type lemon billiards
Črt Lozej, Dragan Lukman, Marko Robnik, 2021, izvirni znanstveni članek

Opis: In this paper, the fluctuation properties of the number of energy levels (mode fluctuation) are studied in the mixed-type lemon billiards at high lying energies. The boundary of the lemon billiards is defined by the intersection of two circles of equal unit radius with the distance 2B between the centers, as introduced by Heller and Tomsovic. In this paper, the case of two billiards, defined by B = 0.1953, 0.083, is studied. It is shown that the fluctuation of the number of energy levels follows the Gaussian distribution quite accurately, even though the relative fraction of the chaotic part of the phase space is only 0.28 and 0.16, respectively. The theoretical description of spectral fluctuations in the Berry-Robnik picture is discussed. Also, the (golden mean) integrable rectangular billiard is studied and an almost Gaussian distribution is obtained, in contrast to theory expectations. However, the variance as a function of energy, E, behaves as - E, in agreement with the theoretical prediction by Steiner.
Ključne besede: nonlinear dynamics, quantum chaos, mixed-type systems, energy level statistics, lemon billiards, billiards
Objavljeno v DKUM: 13.10.2023; Ogledov: 518; Prenosov: 24
.pdf Celotno besedilo (1,40 MB)
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