1. The changing world dynamics of research performanceMarko Marhl, Rene Markovič, Vladimir Grubelnik, Matjaž Perc, 2025, original scientific article Abstract: In recent years, a notable diversification in the geographical representation of the World's top universities could be observed. Chinese universities play an increasingly prominent role in these rankings, thus indicating that we might be in the midst of a regional shift in academic performance. To explore this dynamics, we analyze seven years' worth of data used for university rankings by academic subjects from the Academic Ranking of World Universities (ARWU). We focus on China, Europe, the USA, and other global regions of the world. We find that China has indeed seen an unprecedented growth in Engineering and Life Sciences research, positioning itself rather firmly as a leader in these fields. Conversely, the USA leads in the Social Sciences, while Europe excels in Geography, Ecology, Public and Business Administration, and Pharmacy. Other regions worldwide stand out in Transportation Science, Nursing, and Hospitality & Tourism Management. These results reveal the evolving landscape of global academic research, highlighting regional strengths and emerging world trends in subject-specifc excellence. Keywords: research dynamics, academic excellence, geographical diversifcation, University rankings Published in DKUM: 11.02.2025; Views: 0; Downloads: 2
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2. Computational analysis of S1PR1 SNPs reveals drug binding modes relevant to multiple sclerosis treatmentKatarina Kores, Samo Lešnik, Urban Bren, 2024, original scientific article Keywords: molecular dynamics simulations, personalized therapy, single nucleotide polymorphisms, SNPs, linear interaction energy, LIE, multiple sclerosis, MS Published in DKUM: 03.02.2025; Views: 0; Downloads: 2
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3. Collective dynamics of stock market effciencyLuiz G. A. Alves, Higor Y. D. Sigaki, Matjaž Perc, Haroldo V. Ribeiro, 2020, original scientific article Abstract: Summarized by the efcient market hypothesis, the idea that stock prices fully refect all available information is always confronted with the behavior of real-world markets. While there is plenty of evidence indicating and quantifying the efciency of stock markets, most studies assume this efciency to be constant over time so that its dynamical and collective aspects remain poorly understood. Here we defne the time-varying efciency of stock markets by calculating the permutation entropy within sliding time-windows of log-returns of stock market indices. We show that major world stock markets can be hierarchically classifed into several groups that display similar long-term efciency profles. However, we also show that efciency ranks and clusters of markets with similar trends are only stable for a few months at a time. We thus propose a network representation of stock markets that aggregates their short-term efciency patterns into a global and coherent picture. We fnd this fnancial network to be strongly entangled while also having a modular structure that consists of two distinct groups of stock markets. Our results suggest that stock market efciency is a collective phenomenon that can drive its operation at a high level of informational efciency, but also places the entire system under risk of failure. Keywords: collective dynamics, social physics, econophysics, stock market Published in DKUM: 14.01.2025; Views: 0; Downloads: 2
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4. A system dynamics approach to decision-making tools in farm tourism developmentMaja Borlinič Gačnik, Črtomir Rozman, Andrej Škraba, Boris Prevolšek, 2020, original scientific article Abstract: Background: Besides visiting the main tourist attractions in Slovenia, many tourists want to spend their free time in the countryside as well, but the number of farming establishments in Slovenia diminished distinctly in the last years.
Objectives: This paper aims to develop a system dynamics model, with the goal to analyse dynamics of the diversification of agricultural holdings into farm tourism activities in Slovenia.
Methods/Approach: A system dynamics methodology was chosen to model the diversification in farm tourism. First, we present a basic concept of a system dynamics model with a causal loop diagram. Further, a system dynamics model with different scenarios is presented.
Results: The main feedback loops were identified, and the simulation model was used to analyse different simulation scenarios of the transition of farming establishments into farm tourism facilities.
Conclusions: The model provides the answers to the strategic questions about the dynamics of transfer into tourist farms, using several simulation scenarios. The transition mainly relies on subsidies, promotion of diversification and the growth of rural tourism, which provides a relevant direction for the development of future incentives. Keywords: farm tourism, rural tourism, modelling, system dynamics, causal loop diagram, simulation Published in DKUM: 13.01.2025; Views: 0; Downloads: 2
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5. Interlayer connectivity affects the coherence resonance and population activity patterns in two-layered networks of excitatory and inhibitory neuronsDavid Ristič, Marko Gosak, 2022, original scientific article Abstract: The firing patterns of neuronal populations often exhibit emergent collective oscillations, which can display substantial regularity even though the dynamics of individual elements is very stochastic. One of the many phenomena that is often studied in this context is coherence resonance, where additional noise leads to improved regularity of spiking activity in neurons. In this work, we investigate how the coherence resonance phenomenon manifests itself in populations of excitatory and inhibitory neurons. In our simulations, we use the coupled FitzHugh-Nagumo oscillators in the excitable regime and in the presence of neuronal noise. Formally, our model is based on the concept of a two-layered network, where one layer contains inhibitory neurons, the other excitatory neurons, and the interlayer connections represent heterotypic interactions. The neuronal activity is simulated in realistic coupling schemes in which neurons within each layer are connected with undirected connections, whereas neurons of different types are connected with directed interlayer connections. In this setting, we investigate how different neurophysiological determinants affect the coherence resonance. Specifically, we focus on the proportion of inhibitory neurons, the proportion of excitatory interlayer axons, and the architecture of interlayer connections between inhibitory and excitatory neurons. Our results reveal that the regularity of simulated neural activity can be increased by a stronger damping of the excitatory layer. This can be accomplished with a higher proportion of inhibitory neurons, a higher fraction of inhibitory interlayer axons, a stronger coupling between inhibitory axons, or by a heterogeneous configuration of interlayer connections. Our approach of modeling multilayered neuronal networks in combination with stochastic dynamics offers a novel perspective on how the neural architecture can affect neural information processing and provide possible applications in designing networks of artificial neural circuits to optimize their function via noise-induced phenomena. Keywords: neuronal dynamics, coherence resonance, excitatory neurons, inhibitory neurons, neural network, multilayer network, interlayer connectivity Published in DKUM: 20.12.2024; Views: 0; Downloads: 2
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6. Developing a diversification strategy of non-agricultural activities on farms using system dynamics modelling : a case study of SloveniaMaja Borlinič Gačnik, Boris Prevolšek, Karmen Pažek, Črtomir Rozman, Andrej Škraba, 2022, original scientific article Abstract: Purpose: This paper aims to analyse the main variables and causal relationships in the system structure of the diversification of non-agricultural activities on agricultural holdings using system dynamics (SD) modelling. The SD model aims to simulate depictions of the behaviour of the real system while testing the effects of alternative decisions over time.
Design/methodology/approach: An SD methodology was chosen to model diversification in farm tourism.
Findings: A system approach increases the authors’ understanding of the transition of agricultural holdings to farm tourism. The results indicate that the transition to farm tourism depends on the level of tourism development in a certain area. The system is influenced by subsidies allocated by authorities to expand primary agricultural activities. The model describes a situation in which the tourism and agricultural industries have been affected by the COVID-19 pandemic.
Research limitations/implications: The research is limited by the small set of available data due to the limited number of farms in Slovenia. One major problem is the difference in statistical data on the same activity collected from different institutions in Slovenia.
Practical implications: The paper includes implications for understanding the transition process to farm tourism, allowing policymakers to experiment with subsidies and promotion to explore the efficacy and efficiency of proposed policies.
Originality/value: This study provides a structured, systemic view of the diversification of non-agricultural activities on agricultural holdings, where the simulation results are a reliable reflection of the behaviour of the actual system being modelled. Keywords: system dynamics, modelling, simulation, diversification, farm tourism, farm policy, Slovenia, simulation scenarious Published in DKUM: 11.12.2024; Views: 0; Downloads: 2
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7. Topological features of spike trains in recurrent spiking neural networks that are trained to generate spatiotemporal patternsOleg Maslennikov, Matjaž Perc, Vladimir Nekorkin, 2024, original scientific article Abstract: In this study, we focus on training recurrent spiking neural networks to generate spatiotemporal patterns in the form of closed two-dimensional trajectories. Spike trains in the trained networks are examined in terms of their dissimilarity using the Victor-Purpura distance. We apply algebraic topology methods to the matrices obtained by rank-ordering the entries of the distance matrices, specifically calculating the persistence barcodes and Betti curves. By comparing the features of dierent types of output patterns, we uncover the complex relations between low-dimensional target signals and the underlying multidimensional spike trains. Keywords: topological features, neural networks, spatiotemporal patterns, nonlinear dynamics Published in DKUM: 27.11.2024; Views: 0; Downloads: 0
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8. Diverse strategic identities induce dynamical states in evolutionary gamesIrene Sendiña-Nadal, Inmaculada Leyva, Matjaž Perc, David Papo, Marko Jusup, Zhen Wang, Juan A. Almendral, Pouya Manshour, Stefano Boccaletti, 2020, original scientific article Abstract: Evolutionary games provide the theoretical backbone for many aspects of our social life: from cooperation to crime, from climate inaction to imperfect vaccination and epidemic spreading, from antibiotics overuse to biodiversity preservation. An important, and so far overlooked, aspect of reality is the diverse strategic identities of individuals. While applying the same strategy to all interaction partners may be an acceptable assumption for simpler forms of life, this fails to account for the behavior of more complex living beings. For instance, we humans act differently around different people. Here we show that allowing individuals to adopt different strategies with different partners yields a very rich evolutionary dynamics, including time-dependent coexistence of cooperation and defection, systemwide shifts in the dominant strategy, and maturation in individual choices. Our results are robust to variations in network type and size, and strategy updating rules. Accounting for diverse strategic identities thus has far-reaching implications in the mathematical modeling of social games. Keywords: cooperation, evolutionary game theory, social physics, collective dynamics, complex system Published in DKUM: 20.11.2024; Views: 0; Downloads: 3
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9. Strategically positioning cooperators can facilitate the contagion of cooperationGuoli Yang, Matteo Cavaliere, Cheng Zhu, Matjaž Perc, 2021, original scientific article Abstract: The spreading of cooperation in structured population is a challenging problem which can be observed at diferent scales of social and biological organization. Generally, the problem is studied by evaluating the chances that few initial invading cooperators, randomly appearing in a network, can lead to the spreading of cooperation. In this paper we demonstrate that in many scenarios some cooperators are more infuential than others and their initial positions can facilitate the spreading of cooperation. We investigate six diferent ways to add initial cooperators in a network of cheaters, based on diferent network-based measurements. Our research reveals that strategically positioning the initial cooperators in a population of cheaters allows to decrease the number of initial cooperators necessary to successfully seed cooperation. The strategic positioning of initial cooperators can also help to shorten the time necessary for the restoration of cooperation. The optimal ways in which the initial cooperators should be placed is, however, non-trivial in that it depends on the degree of competition, the underlying game, and the network structure. Overall, our results show that, in structured populations, few cooperators, well positioned in strategically chosen places, can spread cooperation faster and easier than a large number of cooperators that are placed badly. Keywords: cooperation, evolutionary game theory, social physics, collective dynamics, complex system Published in DKUM: 22.10.2024; Views: 0; Downloads: 1
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10. Collective dynamics of heterogeneously and nonlinearly coupled phase oscillatorsCan Xu, Xiaohuan Tang, Huaping Lü, Karin Alfaro-Bittner, Stefano Boccaletti, Matjaž Perc, Shuguang Guan, 2021, original scientific article Abstract: Coupled oscillators have been used to study synchronization in a wide range of social, biological, and physical systems, including pedestrian-induced bridge resonances, coordinated lighting up of firefly swarms, and enhanced output peak intensity in synchronizing laser arrays. Here we advance this subject by studying a variant of the Kuramoto model, where the coupling between the phase oscillators is heterogeneous and nonlinear. In particular, the quenched disorder in the coupling strength and the intrinsic frequencies are correlated, and the coupling itself depends on the amplitude of the mean field of the system. We show that the interplay of these factors leads to a fascinatingly rich collective dynamics, including explosive synchronization transitions, hybrid transitions with hysteresis absence, abrupt irreversible desynchronization transitions, and tiered phase transitions with or without a vanishing onset. We develop an analytical treatment that enables us to determine the observed equilibrium states of the system, as well as to explore their asymptotic stability at various levels. Our research thus provides theoretical foundations for a number of self-organized phenomena that may be responsible for the emergence of collective rhythms in complex systems. Keywords: coupled oscillators, synchronization, Kuramoto model, collective dynamics, phase transition Published in DKUM: 22.10.2024; Views: 0; Downloads: 1
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